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Perl Programming for Life Sciences

Monday and Tuesday February 15 - 16, 2010


The course aims to provide basic knowledge in PERL scripting to biomedical researchers. At the end of the course, participants should be able to write small PERL scripts to:
- Import/export data from/to Excel spreadsheets;
- Retrieve relevant information from a text file and convert it to different formats;

Requirements:
No particular programming knowledge is required in order to attend the course.

Important:
To ensure a working setup for the hands-on sessions, every participant is requested to bring his own laptop with > 2GB RAM, >5GB available hard drive space and a working wireless connection.
Accepted OSes are: Linux(es), Mac OSX and Windows (XP,Vista,Seven).

More details about required additional software will be provided later.

 

Teachers:
Vassilios Ioannidis (SIB)
Armand Valsesia (LICR, SIB)

 

Location:
Reading room 414, Amphimax Building (Quartier Sorge, 1015 Dorigny)

 

Schedule:
Monday February 15
Time Topic Speaker / Staff
08h45 -10h30 Introduction to Perl - part I Vassilios Ioannidis
10h45 - 12h30 Exercises Staff
13h30 - 15h30 Introduction to Perl - part II Armand Valsesia
16h00 - 18h00 Exercises Staff

 

Tuesday February 16
Time Topic Speaker / Staff
08h45 -10h30 Introduction to Perl Regular Expressions Armand Valsesia
10h45 - 12h30 Exercises Staff
14h00 - 18h00 Exercises Staff

 

Registration is closed


(updated on July 30, 2014)

Registered participants:

(21 registrations)

Status Firstname Lastname Departement
Post-doc
Eligio
Bossolini
Institute of Plant Sciences
Post-doc
Belinda
Campos Xavier
CHUV-PMO
Post-doc
Donatella
Canella
CIG
Masters student
Ousmane Hamadoun
Cisse
IMUL, CHUV
PhD student
Gwendoline
DEGUEURCE
LILIANE MICHALIK
Post-doc
Naryttza
Diaz
Post-doc
Marc
Friedli
GHI
PhD student
Carine
Gubelmann
IBI
Post-doc
Charlotte
Henrichsen
CIG
PhD student
Katrin
Hermann
Plant science
Other
Markus
Kohnen
CIG
PhD student
Anna
Kostikova
DEE
PhD student
Jose
Marulanda
DEE
Post-doc
Joƫlle
Michaud
CIG
Post-doc
Laureane
Mittaz Crettol
Pediatrics
PhD student
Charlotte
Ndiribe
Ecology & Evolution
PhD student
Jaime Humberto
REINA
CIG
Group leader
Carlo
Rivolta
DGM
Post-doc
Nicolas
Rotman
CIG
Group leader
Bruno
Vogt
Medecine
Other
Patrice
Waridel
Center for Integrative Genomics

 

 

Latest update 2010-01-16
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