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Ensembl: beyond the website

Thursday 26 - Friday 27 November, 2009


This 2-day workshop is aimed at developers interested in exploring Ensembl beyond the website. The workshop will covers the Ensembl core and compara databases, and how to programmatically access their data. For each databases the API design as well as its most important objects and their methods will be presented. This will be followed by practical sessions in which the participants can put the learned into practice.

Requirements:
Participants are expected to have experience in writing simple Perl scripts and a background in object oriented programming techniques. Being familiar with databases (MySQL) would be an advantage.

Important:
All participants are kindly requested to bring a laptop for the exercises.

 

Speaker:
Benoît Ballester (EBI)

 

Location:
reading room of the Genopode Building (Quartier Sorge, 1015 Dorigny)

 

 

Thursday 26 November
Time Topic Speaker
09h00 - 17h30 Ensembl Core API Benoît Ballester

 

Friday 27 November
Time Topic Speaker
09h00 - 17h30 Ensembl Compara API Benoît Ballester
Staff:
Fabrice David, Yohan Jarosz

 

Registration is closed


(updated on August 23, 2014)

Registered participants:

(21 confirmed registrations)

Status Firstname Lastname Departement
PhD student
Frederic
Bastian
DEE
PhD student
Sandra
Calderon Copete
Vital-IT
Post-doc
Fernando
Cruz Rodriguez
Ecology and Evolution
Other
Laurent
Falquet
PhD student
Mathias
Ganter
D-BSSE
PhD student
Walid
Gharib
DEE
Other
Adamandia
Kapopoulou
Sciences de la Vie
PhD student
Georges
Khazen
Brain Mind Institute
Other
Gr├ęgory
Lefebvre
BBCF
Post-doc
Leleu
Marion
BBCF-UPDUB
Other
Olivier
Martin
Vital-it
Group leader
Alexandre
Masselot
isb-sib
PhD student
Andreas
Massouras
SV
Other
Antonia
Mayer
DMF/DEE
Other
S├ębastien
Moretti
DEE
Other
Marco
Pagni
Vital-IT
Other
Sylvain
Pradervand
CIG
PhD student
Julien
Roux
DEE
Other
Thierry
Sengstag
BCF
Post-doc
Bernhard
Sonderegger
ISREC
Other
Nadine
Zangger
SV/GHI LVG-VDG

 

 

Latest update 2009-11-27
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