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Protein-Protein Interactions:
Protein functions identified through their interacting partners (2nd date)

Friday October 16, 2009


The aim of this workshop is to give an insight in the field of protein functions through the use of both computationally derived predictions and large to medium scale protein interactions screen (e.g. yeast two hybrid, tap-tag-immunoprecipitations, siRNA screen).
Traditionally protein functions has been assigned through the use of domain identification, enzymatic activity etc. With the wealth of data provided by the mass sequencing of several genomes this allows the development of several methodologies that could infer functional protein interacting partners [Eisenberg 2000 Nature].

However using these types of data became difficult, this required graph-based approaches, and several tools have been developed. The aim of the workshop is to provide the first step in the use of these tools and the identification of the different resources providing protein-protein interaction data, functional predictions.

 

Teacher:
Ioannis Xenarios (SIB)

 

Location:
Computer room 146, Amphipole Building (Quartier Sorge, 1015 Dorigny)

 

 

Time Topic Speakers
09h00 -10h15 Introduction to protein-protein interactions
(theory)
I. Xenarios
staff
10h30 - 12h00 Functional predictions methods
(theory)
I. Xenarios
staff
13h30 - 17h30 Exercices
(you may login as guest)
I. Xenarios
staff

 

Registration is closed


(updated on February 08, 2012)

Registered participants:

(28 confirmed registrations)

Status Firstname Lastname Departement Email
Post-doc
Ivan
Acosta
DBMV
PhD student
Pénélope
Andreux
Life sciences - LISP
PhD student
Larissa
Angehnr
SV
Other
Florence
Armand
PTP
Post-doc
Bulak
Arpat
DBMV
Post-doc
Nathalie
Bot
Brain mind institute
Post-doc
Jeffrey
Chen
SV-GHI-UPCOL
Group leader
Angelos
Constantinou
Biochemistry
Post-doc
Sébastien
Desfarges
Microbiology
Post-doc
Saviana
Di Giovanni
LMNN
Post-doc
Sascha
Feuerhahn
SV ISREC UPLIN
Post-doc
Jose Luis
Galbete
Brain mind institute
Post-doc
Christophe
Héligon
CIG
Other
Adamandia
Kapopoulou
Sciences de la Vie
PhD student
Kyriakos
KOKKORIS
FBM
Post-doc
Asvin
Lakkaraju
GHI
PhD student
Vered
Machluf
sv
Post-doc
Sophie
Magnet
sv
Group leader
Agnese
Mariotti
Division Exper Oncology
Post-doc
Melanie
METRICH
Department of medecine
Post-doc
Sunil
Raghav
IBI
Post-doc
Margalida
Rotger
IMUL
Post-doc
Paula
Salinas
Biologie Moleculaire Vegetale
PhD student
Katarzyna
Sikora
SV - ISREC
PhD student
Swapna
Uplekar
SV
Other
Miguel
Van Bemmelen
Pharmacologie
Other
Patrice
Waridel
CIG
Post-doc
Nadine
Zangger
GHI


Received submissions

(6 submissions)

Status Firstname Lastname Departement Email
Masters student
Zeineb
Benabdallah
IN
Post-doc
Giovanni
Busco
farmacologie et toxicologie
Post-doc
Antony
Croxatto
IMUL
Post-doc
Michel
Cuendet
Molecular Modelling Group
PhD student
Ulrike
Haessler
SV
Other
Frédéric
Schütz

 

 

Latest update 2009-10-14
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