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Introduction to Homology Modeling

Friday December 07, 2007


The experimental techniques for the determination of the 3D structure of proteins have significantly progressed recently. As a consequence, the number of known 3D structures increases continuously, with about 35,000 structures currently available. However, this still only covers a small fraction of the proteome.
This workshop first aims at introducing the homology modeling techniques. This approach is a method for constructing a theoretical model of the 3D structure of a protein at the atomic level, based on its sequence and the experimentally determined structures of similar proteins.
In addition, an introductory course to the design of high quality images for publication will be given.

This tutorial make use of the free program Chimera, which can be found at the following address: http://www.cgl.ucsf.edu/chimera

 

Teachers:
Olivier Michielin (LICR, UNIL, SIB)
Vincent Zoete (LICR, UNIL, SIB)

 

Location:
reading room of the Genopode Building (Quartier Sorge, 1015 Dorigny)

 

 

Time Topic Speakers
09:00 - 10:00 Homology Modeling (pdf) O. Michielin
10:30 - 12:00 Chimera tutorial (pdf) V. Zoete
12:00 Lunch  
13h30 - 16h00 practicals Staff
16h00 - 17h00 Exam Staff

 

Registration is closed


Participants:

(14 submissions)

Status Firstname Lastname Departement Email
PhD student
BenoƮte
Bargeton
DPT
Group leader
Richard
Benton
CIG
PhD student
Rosie
Dawaliby
IB
Post-doc
Adamandia
Kapopoulou
EPFL
Group leader
Stephan
Kellenberger
Pharmacology
Post-doc
Annemieke
Michels
CIG
Other
Gregoire
Michielin
EPFL
Other
Sebastien
Moretti
SIB
PhD student
Gaetana
Restivo
Biochemistry
Other
Ken
Steinegger
CHUV
PhD student
Bernd
Strasser
DB
PhD student
Romain
Studer
DEE
PhD student
Armand
Valsesia
SIB
PhD student
Martin
Zieger
Biochemistry

 

 

Latest update 2007-12-07
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